HPC Public Documentation
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HPC Documentation
HPC Course
HPC Public Documentation
HPC Documentation
HPC Documentation
Introduction
Access
Access
Access with FreeIPA
Access to MyAccessID
Access with SSH
ETAIS
ETAIS
Overview
Interface Introduction
Account Management
Projects and allocations management
Project membership management
Adding a public SSH key to a profile
Adding HPC cluster nodes / Rocket cluster account
Adding a Cloud and Virtual Machine
VPC Security Groups management
Usage reports
Snapshots
Cloud
Cloud
OpenStack
Backup and monitoring
Docker
Cluster
Cluster
Terms of Use
First steps
First steps
Quick start
Best practices
Running jobs
Running jobs
Cluster partitions
Job limits and queueing
Submitting jobs
GPU computing
Interactive jobs
Binding and Distribution
Array Jobs
Monitoring and managing jobs
Monitoring and managing jobs
Cancelling jobs
Investigating a job failure
Monitoring job resource consumption
Monitoring jobs
Software
Software
Using modules
Spack for managing software
Containers
AlphaFold3
Python environments
RFantibody
AI examples
AI examples
PyTorch on Rocket
TensorFlow on Rocket
File transfer to/out
Backups and snapshots
GATK4 & Cromwell workflow
Project folders and requesting them
Kubernetes
Kubernetes
Quick start
Concepts
Concepts
CI/CD
Databases
GPUs
Ingress
LoadBalancer Service
Persistent storage
Backup and monitoring
Services
Services
SAPU
HPC Backup services
Export
Galaxy
GitLab
Jupyter
HAProxy
Registry
RStudio
S3 object storage on MinIO
SFTP
Vault
Open Ondemand
HPC Course
HPC Course
Lab 1 - Introduction to HPC
Lab 2 - Software and Modules
Lab 3 - Data management
Lab 4 - Running jobs
Lab 5 - Jupyter and RStudio
Lab 6 - Environments and Containers
Lab 7 & 8 - Parallel/GPU computing
Index
This sub-page will contain the new HPC course content in the future.
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